{"id":157,"date":"2021-12-19T00:02:50","date_gmt":"2021-12-18T23:02:50","guid":{"rendered":"http:\/\/metachemibio.webgazel.pl\/?page_id=157"},"modified":"2025-10-22T10:03:00","modified_gmt":"2025-10-22T08:03:00","slug":"physical-properties","status":"publish","type":"page","link":"https:\/\/biochemia.uwm.edu.pl\/metachemibio\/physical-properties\/","title":{"rendered":"Physical properties"},"content":{"rendered":"\n<h4 class=\"wp-block-heading has-medium-font-size\" id=\"physical-properties\">Physical properties<\/h4>\n\n\n\n<figure class=\"wp-block-table is-style-stripes\"><table><tbody><tr><td><a target=\"_blank\" href=\"http:\/\/www.dsf.unica.it\/translocation\/abdb\/\" rel=\"noreferrer noopener\">Antimicrobial Compounds Database<\/a><\/td><td>Malloci G., Vargiu A. V., Serra G., Bosin A., Ruggerone P., Ceccarelli M., A database of force-field parameters, dynamics, and properties of antimicrobial compounds. Molecules, 2015, 20, 13997-14021.&nbsp;<a target=\"_blank\" href=\"http:\/\/www.mdpi.com\/1420-3049\/20\/8\/13997\" rel=\"noreferrer noopener\">Abstract<\/a><\/td><\/tr><tr><td><a href=\"https:\/\/www.chemeo.com\/\" target=\"_blank\" rel=\"noreferrer noopener\">Chemeo<\/a><\/td><td>Provider: C\u00e9ondo GmbH<\/td><\/tr><tr><td><a href=\"https:\/\/qsar.food.dtu.dk\/\" target=\"_blank\" rel=\"noreferrer noopener\">Danish QSAR Database<\/a><\/td><td>Provider: DTU National Food Institute<\/td><\/tr><tr><td><a href=\"https:\/\/rios.mp.fhi.mpg.de\/\" target=\"_blank\" rel=\"noreferrer noopener\">Diatomic Molecular Spectroscopy Database<\/a><\/td><td>Liu X., Truppe S., Meijer G., P\u00e9rez\u2011R\u00edos J., The diatomic molecular spectroscopy database. Journal of Cheminformatics, 2020, 12, Article No 31.&nbsp;<a href=\"https:\/\/jcheminf.biomedcentral.com\/articles\/10.1186\/s13321-020-00433-8\" target=\"_blank\" rel=\"noreferrer noopener\">Abstract<\/a><\/td><\/tr><tr><td><a target=\"_blank\" href=\"http:\/\/virtualchemistry.org\/gmld.php\" rel=\"noreferrer noopener\">GMLD<\/a><\/td><td>van der Spoel D., van Maaren P. J., Caleman C., GROMACS molecule &amp; liquid database. Bioinformatics, 2012, 28, 752-753.&nbsp;<a target=\"_blank\" href=\"http:\/\/bioinformatics.oxfordjournals.org\/content\/28\/5\/752.abstract\" rel=\"noreferrer noopener\">Abstract<\/a><\/td><\/tr><tr><td><a target=\"_blank\" href=\"http:\/\/srdata.nist.gov\/solubility\/\" rel=\"noreferrer noopener\">IUPAC-NIST&nbsp;Solubility&nbsp;Database<\/a><\/td><td><a target=\"_blank\" href=\"http:\/\/srdata.nist.gov\/solubility\/references.aspx\" rel=\"noreferrer noopener\">References<\/a><\/td><\/tr><tr><td><a href=\"http:\/\/mona.fiehnlab.ucdavis.edu\/\" target=\"_blank\" rel=\"noreferrer noopener\">MoNA<\/a><\/td><td>Provider: University of California Davis<\/td><\/tr><tr><td><a target=\"_blank\" href=\"http:\/\/webbook.nist.gov\/chemistry\/\" rel=\"noreferrer noopener\">NIST Chemistry WebBook<\/a><\/td><td>Linstrom P. J., Mallard W. G., The NIST Chemistry WebBook: A chemical data resource on the Internet. Journal of Chemical and Engineering Data, 2001, 46, 1059-1063.&nbsp;<a target=\"_blank\" href=\"http:\/\/pubs.acs.org\/doi\/abs\/10.1021\/je000236i\" rel=\"noreferrer noopener\">Abstract<\/a><\/td><\/tr><tr><td><a target=\"_blank\" href=\"http:\/\/nmrshiftdb.nmr.uni-koeln.de\/\" rel=\"noreferrer noopener\">NMRShiftDB<\/a><\/td><td>Steinbeck C., Kuhn S., NMRShiftDB \u2013 compound identification and structure elucidation support through a free community-built web database. Phytochemistry, 2004, 65, 2711\u20132717.&nbsp;<a target=\"_blank\" href=\"http:\/\/www.sciencedirect.com\/science\/article\/pii\/S003194220400408X\" rel=\"noreferrer noopener\">Abstract<\/a><\/td><\/tr><tr><td><a href=\"https:\/\/np-mrd.org\/\" target=\"_blank\" rel=\"noreferrer noopener\">NP-MRD<\/a><\/td><td>Wishart D. S., Sajed T., Pin M., Poynton E. F., Goel B., Lee B. L., Guo A. C., Saha S., Sayeeda Z., Han S., Berjanskii M., Peters H., Oler E., Gautam V., Jordan T., Kim J., Ledingham B., Tretter Z. M., Koller J. T., Shreffler H. A., Stillwell L. R., Jystad A. M., Govind N., Bade J. L., Sumner L. W., Linington R. G., Cort J. R., The Natural Products Magnetic Resonance Database (NP-MRD) for 2025. Nucleic Acids Research, 2025, 53, D700\u2013D708. <a href=\"https:\/\/academic.oup.com\/nar\/article\/53\/D1\/D700\/7906838\" target=\"_blank\" rel=\"noreferrer noopener\">Abstract<\/a><\/td><\/tr><tr><td><a href=\"http:\/\/opendatafit.org\/\" target=\"_blank\" rel=\"noreferrer noopener\">Open Data Fit<\/a><\/td><td>Hibbert D. B., Thordarson P., The death of the Job plot, transparency, open science and online tools, uncertainty estimation methods and other developments in supramolecular chemistry data analysis. Chemical Communications, 2016, 52, 12792-12805.&nbsp;<a href=\"http:\/\/pubs.rsc.org\/is\/content\/articlelanding\/2016\/cc\/c6cc03888c#!divAbstract\" target=\"_blank\" rel=\"noreferrer noopener\">Abstract<\/a><\/td><\/tr><tr><td><a href=\"http:\/\/osdb.info\/\" target=\"_blank\" rel=\"noreferrer noopener\">OSDB<\/a><\/td><td>Chalk S. J., The Open Spectral Database: an open platform for sharing and searching spectral data. Journal of Cheminformatics, 2016, 8, Article No 55.&nbsp;<a href=\"https:\/\/jcheminf.springeropen.com\/articles\/10.1186\/s13321-016-0170-2\" target=\"_blank\" rel=\"noreferrer noopener\">Abstract<\/a><\/td><\/tr><tr><td><a href=\"https:\/\/permm.phar.umich.edu\/\" target=\"_blank\" rel=\"noreferrer noopener\">PerMM<\/a><\/td><td>Lomize A. L., Hage J. M., Schnitzer K., Golobokov K., LaFaive M. B., Forsyth A. C., Pogozheva I. D., PerMM: a web tool and database for analysis of passive membrane permeability and translocation pathways of bioactive molecules. Journal of Chemical Information and Modeling, 2019, 59, 3094-3099.&nbsp;<a href=\"https:\/\/pubs.acs.org\/doi\/abs\/10.1021\/acs.jcim.9b00225\" target=\"_blank\" rel=\"noreferrer noopener\">Abstract<\/a><\/td><\/tr><tr><td><a target=\"_blank\" href=\"http:\/\/pqr.pitt.edu\/home\" rel=\"noreferrer noopener\">Pitt Quantum Repository<\/a><\/td><td>Provider: University of Pittsburgh<\/td><\/tr><tr><td><a href=\"https:\/\/quandb.cmdrg.com\/#\/\" target=\"_blank\" rel=\"noreferrer noopener\">QuanDB<\/a><\/td><td>Yang Z., Huang T., Pan L., Wang J., Wang L., Ding J., Xiao J., QuanDB: a quantum chemical property database towards enhancing 3D molecular representation learning. Journal of Cheminformatics, 2024, 16, Article No 48. <a href=\"https:\/\/jcheminf.biomedcentral.com\/articles\/10.1186\/s13321-024-00843-y\" target=\"_blank\" rel=\"noreferrer noopener\">Abstract<\/a><\/td><\/tr><tr><td><a href=\"https:\/\/sdbs.db.aist.go.jp\/sdbs\/cgi-bin\/direct_frame_top.cgi\" target=\"_blank\" rel=\"noreferrer noopener\">SDBS<\/a><\/td><td>Provider: National Institute of Advanced Industrial Science and Technology (AIST)<\/td><\/tr><tr><td><a href=\"https:\/\/sistematx.ufpb.br\/\" target=\"_blank\" rel=\"noreferrer noopener\">SistematX<\/a><\/td><td>Costa R. P. O., Lucena L. F., Silva L. M. A., Zocolo G. J., Herrera-Acevedo C., Scotti L., Da-Costa F. B., Ionov N., Poroikov V., Muratov E. N., Scotti M. T., The SistematX web portal of natural products: an update. Journal of Chemical Information and Modeling, 2021, 61, 2516\u20132522.&nbsp;<a href=\"https:\/\/pubs.acs.org\/doi\/10.1021\/acs.jcim.1c00083\" target=\"_blank\" rel=\"noreferrer noopener\">Abstract<\/a><\/td><\/tr><\/tbody><\/table><\/figure>\n","protected":false},"excerpt":{"rendered":"<p>Physical properties Antimicrobial Compounds Database Malloci G., Vargiu A. V., Serra G., Bosin A., Ruggerone P., Ceccarelli M., A database of force-field parameters, dynamics, and properties of antimicrobial compounds. Molecules, 2015, 20, 13997-14021.&nbsp;Abstract Chemeo Provider: C\u00e9ondo GmbH Danish QSAR Database Provider: DTU National Food Institute Diatomic Molecular Spectroscopy Database Liu X., Truppe S., Meijer G.,&#8230;<\/p>\n","protected":false},"author":3,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_lmt_disableupdate":"no","_lmt_disable":"no","_kad_post_transparent":"","_kad_post_title":"","_kad_post_layout":"left","_kad_post_sidebar_id":"sidebar-primary","_kad_post_content_style":"boxed","_kad_post_vertical_padding":"","_kad_post_feature":"","_kad_post_feature_position":"","_kad_post_header":false,"_kad_post_footer":false,"footnotes":""},"class_list":["post-157","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/biochemia.uwm.edu.pl\/metachemibio\/wp-json\/wp\/v2\/pages\/157","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/biochemia.uwm.edu.pl\/metachemibio\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/biochemia.uwm.edu.pl\/metachemibio\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/biochemia.uwm.edu.pl\/metachemibio\/wp-json\/wp\/v2\/users\/3"}],"replies":[{"embeddable":true,"href":"https:\/\/biochemia.uwm.edu.pl\/metachemibio\/wp-json\/wp\/v2\/comments?post=157"}],"version-history":[{"count":9,"href":"https:\/\/biochemia.uwm.edu.pl\/metachemibio\/wp-json\/wp\/v2\/pages\/157\/revisions"}],"predecessor-version":[{"id":1139,"href":"https:\/\/biochemia.uwm.edu.pl\/metachemibio\/wp-json\/wp\/v2\/pages\/157\/revisions\/1139"}],"wp:attachment":[{"href":"https:\/\/biochemia.uwm.edu.pl\/metachemibio\/wp-json\/wp\/v2\/media?parent=157"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}