NameLinkDescription
ACHPhttp://118.178.58.31:9801/Program predicting anticancer and antihypertensive activity of peptides
ACPredhttp://codes.bio/acpred/Program predicting anticancer activity of peptides
ADP-Fusehttps://balalab-skku.org/ADP-Fuse/Program predicting DPPIV inhibition by peptides
AHTpinhttps://webs.iiitd.edu.in/raghava/ahtpin/index.phpProgram for prediction angiotensin-converting enzyme-inhibitory activity of peptides
ANCHORhttp://anchor.enzim.hu/Program predicting protein binding regions in proteins. Accepts peptide sequences as  queries
AniAMPpredhttps://aniamppred.anvil.app/Program for antibacterial activity prediction
ANNprob-ACPshttps://circular-palatable-term.anvil.app/Program predicting anticancer activity of peptides
AnOxPPhttp://www.cqudfbp.net/AnOxPP/index.jspProgram predicting antioxidative activity of peptides
AnOXPePredhttps://services.healthtech.dtu.dk/service.php?AnOXPePred-1.0Program predicting antioxidative activity of peptides
AntiAngioPredhttps://webs.iiitd.edu.in/raghava/antiangiopred/Program for prediction of antiangiogenic activity of peptides
AntiBP2https://webs.iiitd.edu.in/raghava/antibp2/index.htmlProgram for antibacterial activity prediction
AntiCPhttps://webs.iiitd.edu.in/raghava/anticp/ Program for anticancer activity prediction
AntiCP 2.0https://webs.iiitd.edu.in/raghava/anticp2/Program for anticancer activity prediction
Anti-hypertensive Peptide Predictorhttp://hazralab.iitr.ac.in/ahpp/index.phpProgram predicting Angiotensin I-Converting Enzyme inhibition by peptides
AntiDMPpredhttp://i.uestc.edu.cn/AntiDMPpred/cgi-bin/AntiDMPpred.plProgram predicting antidiabetic activity of peptides
AntiFPhttps://webs.iiitd.edu.in/raghava/antifp/Program predicting antifungal activity of peptides
AntiInflamhttp://metagenomics.iiserb.ac.in/antiinflam/Program predicting anti-inflammatory activity of proteins and peptides
Antimicrobial Peptide Scannerhttps://www.dveltri.com/ascan/Program predicting antimicrobial activity of protein fragments
AntiMPmodhttps://webs.iiitd.edu.in/raghava/antimpmod/Program predicting antimicrobial activity of modified peptides
AntiTBPredhttps://webs.iiitd.edu.in/raghava/antitbpred/Program predicting antitubercular activity of peptides
AtbPpredhttp://thegleelab.org/AtbPpred/Program predicting antitubercular properties of peptides
ATPinthttps://webs.iiitd.edu.in/raghava/atpint/index.htmlProgram searching  for residues interacting with ATP In proteins. Accepts peptide sequences as queries
ATSEhttp://server.malab.cn/ATSEProgram predicting toxicity of peptides
AutoPeptideMLhttp://peptide.ucd.ie/AutoPeptideMLMachine learning application for building peptide bioactivity predictors
AVP-IC50Predhttp://crdd.osdd.net/servers/ic50avp/Program predicting IC50 values for antiviral activity of peptides
AVPIdenhttps://awi.cuhk.edu.cn/AVPIden/#/Program predicting antiviral activity of peptides
AVPpredhttp://crdd.osdd.net/servers/avppredProgram predicting antiviral properties of peptides
B3Predhttps://webs.iiitd.edu.in/raghava/b3pred/Program predicting blood-brain barrier penetration by peptides
BAGEL4http://bagel4.molgenrug.nl/Program for prediction of antibacterial activity of peptides
BBPredhttp://bbpppred.xialab.info/Program predicting crossing of peptides through blood-brain barrier
BCheRF-CPPredhttp://comptools.linc.ufpa.br/BChemRF-CPPred/Program predicting cell penetration by peptides
BERT4Bitterhttp://pmlab.pythonanywhere.com/BERT4BitterProgram predicting bitterness of peptides
BioTrianglehttp://biotriangle.scbdd.com/Program applicable for prediction of peptide-protein interactions. Provides options accepting amino acid sequences (BioPPI) or SMILES codes (BioCPI) as  queries.
BotDBhttp://botdb.abcc.ncifcrf.gov/toxin/kiConverter.jspProgram converting IC50 values into inhibition constant for enzyme inhibitors
BTXPredhttps://webs.iiitd.edu.in/raghava/btxpred/Program classifying peptides and proteins as bacterial toxins
CABS-dockhttp://biocomp.chem.uw.edu.pl/CABSdockProgram for prediction of peptide-protein interactions
CAMPhttp://www.bicnirrh.res.in/antimicrobial/Program predicting antimicrobial activity of peptides
CAPTUREhttps://sds_genetic_analysis.opendfki.de/CAPTURE/Program predicting anticancer activity of peptides
CDPredhttps://webs.iiitd.edu.in/raghava/cdpred/Program predicting celiac-toxic epitopes and motifs
CELA-MFPhttp://dreamai.cmii.online/CELA-MFPProgram for peptide bioactivity prediction
CellPPD-Modhttps://webs.iiitd.edu.in/raghava/cellppdmod/Program predicting cell penetration by peptides
ClassAMPhttp://www.bicnirrh.res.in/classamp/Program predicting antibacterial, antiviral and antifungal activity of peptides
ClanToxhttp://www.clantox.cs.huji.ac.ilProgram classifying peptides and proteins as animal toxins
ClassAMPhttp://www.bicnirrh.res.in/classamp/Program predicting antibacterial, antiviral and antifungal activity of peptides
CLIPhttp://biomine.cs.vcu.edu/servers/CLIP/Program predicting linear interacting peptides from protein sequences. Accepts polypeptide sequences as a queries.
ClusProhttps://cluspro.org/home.phpProgram for peptide-protein docking
COVID-19 Docking Serverhttps://ncov.schanglab.org.cn/index.php/Server for docking peptides to COVID-19 proteins
CpACpPhttp://cbb1.ut.ac.ir/CpACpP/IndexServer for anticancer activity prediction
CPPred-RFhttp://server.malab.cn/CPPred-RF/index.jspProgram for prediction of cell-penetrating properties of peptides
Deep-ABPpred
https://abppred.anvil.app/Program finding fragments with potential antibacterial activity in protein sequences
Deep-AFPpredhttps://afppred.anvil.app/Program predicting antifungal activity of peptides
DefPredhttps://webs.iiitd.edu.in/raghava/defpred/Program for defensins prediction
ENNAVIAhttps://research.timmons.eu/ennaviaProgram predicting antiviral activity of peptides
FADPredhttps://webs.iiitd.edu.in/raghava/fadpred/Program for prediction of FAD-binding sites in proteins. Accepts peptide sequences as queries
FEOpti-ACVPhttp://servers.aibiochem.net/soft/FEOpti-ACVP/Program predicting anti-coronavirus activity of peptides
Firestarhttp://firedb.bioinfo.cnio.es/Php/FireStar.phpProgram predicting functional sites in proteins on the basis on sequence or structure. Accepts peptide sequences (>20 amino acid residues) as queries.
GalaxyPepDockhttp://galaxy.seoklab.org/cgi-bin/submit.cgi?type=PEPDOCKProgram for prediction of peptide-protein interactions
GTPBinderhttps://webs.iiitd.edu.in/raghava/gtpbinder/index.htmlProgram for prediction of GTP-binding sites in proteins. Accepts peptide sequences as  queries.
HawkDockhttp://cadd.zju.edu.cn/hawkdock/Server for protein-protein docking. Accepts polypeptide structures
HemoPIhttps://webs.iiitd.edu.in/raghava/hemopi/Program for prediction of hemolytic activity of peptides
HLPpred-Fusehttp://thegleelab.org/HLPpred-Fuse/Program for prediction of hemolytic activity of peptides
HPEPDOCKhttp://huanglab.phys.hust.edu.cn/hpepdock/Program for peptide-protein docking
iACP-FSCMhttp://camt.pythonanywhere.com/iACP-FSCMProgram predicting anticancer activity of peptides
iAMAP-SCMhttp://pmlabstack.pythonanywhere.com/iAMAP-SCMProgram predicting antimalarial activity of peptides
iAMPPredhttp://cabgrid.res.in:8080/amppred/Program predicting antimicrobial activity of peptides
iAntiTBhttp://curata14.bio.kyutech.ac.jp/iAntiTB/Program for prediction of antitubercular activity of peptides
Il4Predhttps://webs.iiitd.edu.in/raghava/il4pred/index.phpProgram for prediction of interleukin-4 inducing activity
iBitter-Fusehttp://camt.pythonanywhere.com/iBitter-FuseProgram predicting peptide bitterness
iBitter-SCMhttp://camt.phytonanywhere.com/iBitter-SCMProgram predicting bitterness of peptides
iDACPhttp://mer.hc.mmh.org.tw/iDACP/Program identifying anticancer peptides
iDPPIV-SCMhttp://camt.phytonanywhere.com/iDPPIV  Program predicting dipeptidyl peptidase  IV inhibitory activity of peptides
iDVIPhttp://mer.hc.mmh.org.tw/iDVIP/Program predicting viral integrase inhibitory activity of peptides
iQSPhttp://codes.bio/iqsp/Program predicting quorum sensing peptides
iUmami-SCMhttp://camt.phytonanywhere.com/iUmami-SCMProgram predicting umami taste of peptides
INTREPIDhttp://phylogenomics.berkeley.edu/interpid/Program for prediction of functional sites in proteins. Accepts peptide sequences as queries
iUP-BERThttps://www.aibiochem.net/servers/iUP-BERT/Program for prediction umami taste of peptides
KELM-CPPpredhttp://sairam.people.iitgn.ac.in/KELM-CPPpred.htmlProgram predicting  peptide ability to cell penetration
LMDIPredhttp://bicresources.jcbose.ac.in/ssaha4/lmdipred/Program predicting  peptide interactions with three the most prevalent peptides recognizing domains in proteins
mACPpredhttp://thegleelab.org/mACPpred/Program predicting anticancer activity of peptides
mAHTPredhttp://thegleelab.org/mAHTPred/Program predicting antihypertensive activity of peptides containing at least 5 amino acid residues
MAT-AHPPhttp://hazralab.iitr.ac.in/ahpp/index.phpProgram predicting Angiotensin I-Converting Enzyme inhibition by peptides
MDockPep2https://zougrouptoolkit.missouri.edu/mdockpep2/index.htmlProgram modeling peptide-protein interactions
mebipredhttps://services.bromberglab.org/mebipred/homeProgram predicting binding metals by proteins. Accepts polypeptide sequences as a queries.
MetaDBSitehttp://projects.biotec.tu-dresden.de/metadbsite/, http://sysbio.zju.edu.cn/metadbsiteProgram of DNA-binding site prediction in protein sequences. Accepts peptide sequences as queries.
Meta-iAVPhttp://codes.bio/meta-iavp/Program predicting antiviral activity of peptides
MetalPredatorhttp://metalweb.cerm.unifi.it/tools/metalpredator/Program predicting iron-binding properties of proteins. Accepts peptide sequences as queries.
MLACPhttps://balalab-skku.org/mlacp2/Program predicting anticancer activity of peptides
MODLINK+http://sbi.imim.es/modlink/Program for prediction of protein-protein interactions. Accepts peptide sequences as  queries.
MultiPephttps://agbg.shinyapps.io/MultiPep/Program for prediction of peptide bioactivity
NADbinderhttps://webs.iiitd.edu.in/raghava/nadbinder/Program predicting NAD binding residues in proteins. Accepts peptide sequences as queries.
NEPTUNEhttp://pmlabstack.pythonanywhere.com/NEPTUNEProgram predicting peptide tumor homing
NeuroPIPredhttps://webs.iiitd.edu.in/raghava/neuropipred/Program predicting activity of insect peptides as neuropeptides
NeuroPred-PLMhttps://huggingface.co/spaces/isyslab/NeuroPred-PLMProgram for neuropeptide prediction
NTXPredhttps://webs.iiitd.edu.in/raghava/ntxpred/Program for prediction the neurotoxic activity of peptides.
PepATTRACThttp://bioserv.rpbs.univ-paris-diderot.fr/services/pepATTRACT/#overviewProgram for modeling interactions between oligopeptides (up to 20 amino acid residues) and proteins.
PepBCLhttps://server.wei-group.net/PepBCL/Program for prediction of peptide-protein interactions
PepSite2http://pepsite2.russelllab.org/Program for prediction of  interactions between proteins and peptides
PeptideLocatorhttp://bioware.ucd.ie/~compass/biowareweb/Program searching for bioactive fragments within protein sequences
PeptideMinehttp://caps.ncbs.res.in/peptidemine/Program searching for peptides interacting with individual proteins
Peptide Prediction Listhttps://biogenies.info/peptide-prediction-list/Metaserver providing access to multiple programs for peptide bioactivity prediction
PeptideRankerhttp://distilldeep.ucd.ie/PeptideRanker/Program for prediction of probability that given peptide is bioactive
Peptiderivehttp://rosie.rosettacommons.org/peptideriveProgram for prediction of peptides inhibiting protein-protein interactions
Peptipediahttps://tools.peptipedia.cl/predict/activity/Program for peptide bioactivity prediction
PIP-ELhttp://thegleelab.org/PIP-EL/Program predicting pro-inflammatory properties of peptides and proteins
PIPER-FlexPepDockhttp://piperfpd.furmanlab.cs.huji.ac.il/Program for peptide-protein docking
PiRaNhAwww.bioinformatics.sussex.ac.uk/PIRANHA http://piranha.protein.osaka-u.ac.jpProgram predicting RNA binding sites in proteins. Accepts peptide sequences as queries.
PlayMoleculehttp://www.playmolecule.org/Web-tool for prediction of the interactions between proteins and small molecules including peptides. Accepts small molecule structures in sdf format.
PreAIPhttp://kurata14.bio.kyutech.ac.jp/PreAIP/Program predicting anti-inflammatory activity of peptides
PredAPPhttp://predapp.xialab.info/Program predicting antiparasitic activity of peptides
Predicting AMPs from Peptideshttp://amp.biosino.org/Program predicting antimicrobial properties of peptides
PreTP-2Lhttp://bliulab.net/PreTP-2L/Program predicting bioactive fragments in protein seqeunces
PreTP-EL
http://bliulab.net/PreTP-EL/Program predicting bioactivity of peptides
ProInflamhttp://metagenomics.iiserb.ac.in/proinflam/Program predicting pro-inflammatory properties of peptides and proteins
ProIn-Fusehttp://kurata14.bio.kyutech.ac.jp/ProIn-Fuse/Program predicting pro-inflammatory activity of peptides
ProteinsPlushttp://proteinsplus.zbh.uni-hamburg.de/Program predicting interactions between small molecules (including peptides) and proteins. Accepts ligand structures in .svg format
PSRQSPhttp://pmlabstack.pythonanywhere.com/PSRQSPProgram predicting quorum sensing propensity of peptides
RealVS

http://noveldelta.com/RealVSProgram predicting interactions of small molecules (e.g. peptides) with opioid receptors and other receptors of neuroactive substances. Accepts SMILES representations
RIPPMinerhttp://www.nii.ac.in/~priyesh/lantipepDB/new_predictions/index.phpProgram predicting occurrence of ribosomally synthesized and post-translationally modified peptidesin protein sequences.
RNAPredhttps://webs.iiitd.edu.in/raghava/rnapred/Program predicting RNA binding sites in proteins. Accepts peptide sequences as a queries
SCMB3PPhttp://pmlabstack.pythonanywhere.com/SCMB3PPProgram predicting blood-brain barrier penetration by peptides
SCMRSAhttp://pmlabstack.pythonanywhere.com/SCMRSAProgram predicting anti-MRSA activity of peptides
SCMTHPhttp://pmlabstack.pythonanywhere.com/SCMTHPProgram predicting peptide tumor homing
Spot-peptidehttp://sparks-lab.org/tom/SPOT-peptide/Program predicting peptide-protein interactions.
StackDPPIVhttp://pmlabstack.pythonanywhere.com/StackDPPIVProgram predicting DPPIV inhibition by peptides
StackIL6http://camt.pythonanywhere.com/StackIL6Program predicting Interleukin 6 induction by peptides
SwissDockhttp://www.swissdock.ch/Program for modeling protein-ligand interactions. Accepts peptide structures in Sybyl.mol2 format
TargetAntiAngiohttp://codes.bio/targetantiangio/Program predicting antiangiogenic properties of peptides
TastePeptides-Metahttp://www.tastepeptides-meta.com/Program predicting peptide taste
TCN-AFPpredhttps://tcn-afppred.anvil.app/Program predicting antifungal activity of peptides and protein fragments
THPephttp://codes.bio/thpep/Program for prediction tumor homing peptides
TIPredhttp://pmlabstack.pythonanywhere.com/TIPredProgram predicting tyrosinase inhibition by peptides
ToxIBTLhttp://server.wei-group.net/ToxIBTL/Program for peptide toxicity prediction
ToxinPredhttps://webs.iiitd.edu.in/raghava/toxinpred/index.htmlProgram for peptide toxicity prediction
ToxinPred 3.0https://webs.iiitd.edu.in/raghava/toxinpred3/Program for peptide toxicity prediction
UmamiPreDLhttps://hub.docker.com/r/arunindiran/umamipredictorProgram predicting umami taste of peptides
UMPred-FRLhttp://pmlabstack.pythonanywhere.com/UMPred-FRLProgram predicting umami taste of peptides
UniDL4BioPephttps://nepc2pvmzy.us-east-1.awsapprunner.com/Program predicting multiple biological activities of peptides
Zhang Lab AHTP predictionhttp://ahtps.zhanglab.site/Program predicting antihypertensive activity of protein fragments