NameLinkDescription
AAgAtlashttp://biokb.ncpsb.org/aagatlas/Database of human autoantigens
AbDesigner3Dhttps://hpcwebapps.cit.nih.gov/AbDesigner3D/Program for design of peptide-based antibodies
AlgPredhttp://www.imtech.res.in/raghava/algpredProgram predicting the allergenicity of peptides
AllAllergyhttp://allallergy.net/Database providing access to information about allergy
AllerBasehttp://bioinfo.net.in/AllerBase/Home.htmlDatabase of allergens
Allergen Databasehttp://allergen.csl.gov.uk/Database of allergens
Allergen Database for Food Safetyhttp://allergen.nihs.go.jp/ADFS/Database of food allergens
AllergenFPhttp://www.ddg-pharmfac.net/AllergenFP/feedback.pyProgram predicting allergenicity of proteins. Accepts oligopeptide sequences.
Allergen Onlinehttp://allergenonline.comDatabase of allergens
AllergenOnline Celiac Diseasehttp://www.allergenonline.org/celiachome.shtmlDatabase of celiac-toxic peptides and proteins associated with the AllergenOnline database
Allergomehttp://www.allergome.org/Database of allergenic molecules.
AllerHunterhttp://tiger.dbs.nus.edu.sg/AllerHunter/Program predicting allergenicity and cross-reactivity of proteins
Allermatchhttp://www.allermatch.orgTool for sequence comparison to allergenic proteins.
AllerTOPhttp://www.ddg-pharmfac.net/AllerTOP/index.htmlProgram predicting allergenicity of proteins. Accepts oligopeptide sequences.
AllFamhttp://www.meduniwien.ac.at/allergens/allfam/Database of allergen families based on Pfam classification
AllPredhttp://www-bionet.sscc.ru/psd/cgi-bin/programs/Allpred/allpred.cgiProgram for prediction of allergenicity of proteins and peptides (length at least 8 amino acid residues)
AntigenDBhttp://www.imtech.res.in/raghava/antigendb

 

http://www.bic.uams.edu/raghava/antigendb

Database of pathogen antigens
AntiJenhttp://www.jenner.ac.uk/antijen/

 

http://www.ddg-pharmfac.net/antijen/AntiJen/antijenhomepage.htm

Database of epitopes
AntiJenhttp://www.jenner.ac.uk/antijen/Database of epitopes
AppAhttp://mspc.bii.a-star.edu.sg/minhn/appa.htmlProgram for analysis antibody-antigen interfaces
Bcipephttp://www.imtech.res.in/raghava/bcipep/Database of B cell epitopes
BEIDhttp://datam.i2r.a-star.edu.sg/BEID/Database of B cell epitopes and their interactions
BepiPredhttp://www.cbs.dtu.dk/services/BepiPred/Program predicting linear B cell epitopes
BEPPEhttp://bioinf.uab.es/BEPPE/Program predicting location of epitopes on the basis of secondary and tertiary structure of proteins
Cross-Reacthttp://curie.utmb.edu/Cross-React.htmlProgram for prediction of cross-reactivity between allergenic proteins on the basis of their structure
dbPepNeohttp://www.biostatistics.online/dbPepNeo/Database of tumor peptide neoantigens
ElliProhttp://tools.iedb.org/ellipro/Program for epitope prediction
EpiChttp://epic.embl.deProgram for epitope prediction, designed to support experiments with antibodies.
EpiDOCKhttp://www.epidock.ddg-pharmfac.net/HomePage.aspxProgram for MHC class II binding prediction.
EpiJenhttp://www.jenner.ac.uk/EpiJen/

 

http://www.ddg-pharmfac.net/epijen/EpiJen/EpiJen.htm

Database of allergenic peptides. Program comparing sequences of proteins and potentially allergenic peptides. Also accepts peptide sequences as the queries.
EPIMHChttp://bio.dfci.harvard.edu/epimhc/Database of allergenic peptides. Program comparing sequences of proteins and potentially allergenic peptides. Also accepts peptide sequences as the queries.
Epitomehttps://www.rostlab.org/services/epitome/index.htmlDatabase of epitopes
EpiToolKithttp://www.epitoolkit.org/Program predicting T cell immune response against proteins or peptides
EpiTOPhttp://www.ddg-pharmfac.net/EpiTOP3/Tool for MHC class II binding prediction
Epitope Cluster Analysis toolhttp://tools.iedb.org/cluster2/Program for clustering epitope sequences
Epitopiahttp://epitopia.tau.ac.il/Program predicting B cell epitopes in protein chains
EPSVR, EPMetahttp://sysbio.unl.edu/services/Tools for prediction of antigenic epitopes
EVALLERhttp://bioinformatics.bmc.uu.se/evaller.html

 

http://www.slv.se/en-gb/Group1/Food-Safety/e-Testing-of-protein-allergenicity/e-Test-allergenicity/

Program predicting the allergenicity of proteins
Expitopehttp://webclu.bio.wzw.tum.de/expitope/Program searching for proteins containing epitopes and proteasome cleavage sites
IEDB-ARhttp://www.immuneepitope.org/Database of epitopes. Program designed for prediction immunological properties of proteins. Part of options accepts oligopeptide sequences as a queries
Il-10Predhttp://crdd.osdd.net/raghava/IL-10pred/Program predicting induction of interleukin-10 by peptides
iLBEhttp://kurata14.bio.kyutech.ac.jp/iLBE/Program identifying linear B-cell epitopes
IMGThttp://imgt.cines.fr/Website of International Immunogenetics Information System providing access to databases and programs from the area of immunology and allergology
ImmunomeBrowserhttp://tools.iedb.org/immunobrowser/Program for epitope mapping in silico
IMTECH Serverhttp://www.imtech.res.in/raghava/Server providing access to bioinformatics tool designed in IMTECH, Chandigargh, India
InformAllhttp://www.foodallergens.info/Portal providing information about food allergy. Contains e.g. database of allergenic proteins from food. Webiste is maintained as a part of the EuroPrevall project
IPDhttp://www.ebi.ac.uk/ipd/Immunopolymorphism database
iTTCA-Hybridhttp://camt.phytonanywhere.com/iTTCA-Hybrid/Program for prediction tumor T cell antigens
IUIS home pagehttp://www.iuisonline.org/Home page of the International Union of Immunological Societies
KISShttp://cbio.ensmp.fr/kiss/Program predicting binding affinity of peptides to MHC alleles

mCSM-AB

http://bleoberis.bioc.cam.ac.uk/mcsm_ab/Program predicting influence of mutations on antigen-antibody intractions
MHCBNhttp://www.imtech.res.in/raghava/mhcbn/index.htmlDatabase of Major Histocompatibility Complex (MHC) binding peptides
MHCMIRhttp://ailab.cs.iastate.edu/mhcmir/Program predicting MHC Class II affinity of peptides and proteins.
MHCPredhttp://www.ddg-pharmfac.net/mhcpred/MHCPred/Program predicting binding of proteins and peptides to Major Hiostocompatibility Complex.
MimoDBhttp://immunet.cn/mimodb/Database of mimotopes. Containing search engine based on BLAST algorithm, accepting peptide sequences as a queries

MtbVeb

http://crdd.osdd.net/raghava/mtbveb/Platform supporting design of vaccines against Mycobacterium tuberculosis
MultiRTAhttp://bordnerlab.org/MultiRTA/Program predicting MHC-binding affinities of peptides
NetMHC

 

NetMHCpan

http://www.cbs.dtu.dk/services/NetMHC/;

 

http://www.cbs.dtu.dk/services/NetMHCpan/ ;

http://www.cbs.dtu.dk/services/NetMHCIIpan/

Programs predicting affinity of peptides to MHC class I
nHLAPredhttp://crdd.osdd.net/raghava/nhlapred/index.htmlServer predicting MHC I-binding epitopes
OmicTools Immunologyhttp://omictools.com/immunology-categoryMetaserver offering access to bioinformatics tools concerning immunology
OptiTopehttp://www.epitoolkit.org/optitopeServer for the selection of an optimal set of peptides for epitope-based vaccines
PAComplexhttp://pacomplex.life.nctu.edu.tw/Program predicting model of MHC-binding of protein or peptide set
POPIhttp://iclab.life.nctu.edu.tw/POPIProgram predicting the allergenicity of proteins and peptides.
POPISKhttp://iclab.life.nctu.edu.tw/POPISK/index.phpProgram predicting T cell reactivity of peptides
ProInflamhttp://metagenomics.iiserb.ac.in/proinflam/Program finding pro-inflammatory epitopes in protein sequences
ProPepperhttps://propepper.net/Database of epitopes of cereal origin
Protegenhttp://www.violinet.org/protegen/Database of antigens involved in vaccines
SABPredhttp://opig.stats.ox.ac.uk/webapps/sabdab-sabpred/WelcomeSAbPred.phpProgram for prediction of epitopes and paratopes, specific fot given antibodie and antibody structure prediction
SCRATCHhttp://www.igb.uci.edu/servers/psss.htmlProgram predicting immunogenicity of peptides
SDAPhttp://fermi.utmb.edu/SDAP/Structural database of allergenic proteins.
SEDBhttp://sedb.bicpu.edu.in/Database of epitope structures
SEPPA 3.0http://bidd2.nus.edu.sg/SEPPA3/Program for prediction of spatial epitopes in proteins and glycoproteins
SORTALLERhttp://sortaller.gzhmc.edu.cn/Program for protein allergenicity prediction. Accepts peptide sequences as a queries.
SPADEhttp://spade.uni-graz.at/Program predicting the presence of discontinuous epitopes and cross-reactivity via comparison of protein surface properties
SVMHChttp://www-bs.informatik.uni-tuebingen.de/SVMHCDatabase of allergenic peptides. Program comparing sequences of proteins and potentially allergenic peptides. Also accepts peptide sequences as the queries.
SVMTriphttp://sysbio.unl.edu/SVMTriP/Program for prediction of epitope location
TEPITOPEpanhttp://www.biokdd.fudan.edu.cn/Service/TEPITOPEpan/Program for peptide:MHCII binding prediction
UniProthttp://beta.uniprot.org/docs/allergenDatabase of allergenic proteins.
Websites concerning the allergens:http://www.hon.ch/Library/Theme/Allergy/Glossary/allergy.html

 

http://www.iit.edu/~sgendel/fa.htm

General information about allergens

 

Sequence database at BISF

WHO-IUIS allergen databasehttp://www.allergen.org/Database of allergens from the list of International Union of Immunological Societies