Amino acids and peptides

AAindexKawashima S., Pokarowski P., Pokarowska M., Kolinski A., Katayama T., Kanehisa M., AAindex: amino acid index database, progress report 2008. Nucleic Acids Research, 2008, 36, D202-D205. Abstract
AHTPDBKumar R., Chaudhary K., Sharma M., Nagpal G., Chauhan J. S., Singh S., Gautam A., Raghava G. P. S., AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides. Nucleic Acids Research, 2015, 43, D956-D962. Abstract
Amino Acids Guide
Antimicrobial Combination NetworksJorge P., Pérez-Pérez M., Pérez Rodríguez G., Fdez-Riverola F., Pereira M. O., Lourenço A., Construction of antimicrobial peptide-drug combination networks from scientific literature based on a semi-automated curation workflow. Database, 2016, Article No baw143. Abstract
BIOPEP-UWMMinkiewicz P., Iwaniak A., Darewicz M., BIOPEP-UWM database of bioactive peptides: current opportunities. International Journal of Molecular Sciences, 2019, 20, Article No 5978. Abstract
BrainpepsVan Dorpe S., Bronselaer A., Nielandt J., Stalmans S., Wynendaele E., Audenaert K., Van De Wiele C., Burvenich C., Peremans K., Hsuchou H., De Tré G., De Spiegeleer B., Brainpeps: The blood-brain barrier peptide database. Brain Structure and Function, 2012, 217, 687-718. Abstract
CancerPPDTyagi A., Tuknait A., Anand P., Gupta S., Sharma M., Mathur D., Joshi A., Singh S., Gautam A., Raghava G. P. S., CancerPPD: a database of anticancer peptides and proteins. Nucleic Acids Research, 2015, 43, D837–D843. Abstract
ClusterMine360Conway K. R., Boddy C. N., ClusterMine360: A database of microbial PKS/NRPS biosynthesis. Nucleic Acids Research, 2013, 41, D402-D407. Abstract
ConjuPepDBBalogh B., Ivánczi M., Nizami B., Beke-Somfai T., Mándity I. M., ConjuPepDB: a database of peptide–drug conjugates. Nucleic Acids Research, 2021, 49, D1102–D1112. Abstract
DFBPQin D., Bo W., Zheng X., Hao Y., Li B., Zheng J., Liang G., DFBP: a comprehensive database of food-derived bioactive peptides for peptidomics research. Bioinformatics, 2022, 38, 3275–3280. Abstract
HemolytikGautam A., Chaudhary K., Singh S., Joshi A., Anand P., Tuknait A., Mathur D., Varshney G. C., Raghava G. P. S., Hemolytik: a database of experimentally determined hemolytic and non-hemolytic peptides. Nucleic Acids Research, 2014, 42, D444–D449. Abstract
ImmunoSPdbUsmani S. S., Agrawal P., Sehgal M., Patel P. K., Raghava G. P. S., ImmunoSPdb: an archive of immunosuppressive peptides. Database, 2019, Article No baz012. Abstract
KEGG peptidesKanehisa M., Furumichi M., Sato Y., Ishiguro-Watanabe M., Tanabe M., KEGG: integrating viruses and cellular organisms. Nucleic Acids Research, 2021, 49, D545–D551. Abstract
NorineFlissi A., Ricart E., Campart C., Chevalier M., Dufresne Y., Michalik J., Jacques P., Flahaut C., Lisacek F., Leclère V., Pupin M., Norine: update of the nonribosomal peptide resource. Nucleic Acids Research, 2020, 48, D465–D469. Abstract
ParaPepMehta D., Anand P., Kumar V., Joshi A., Mathur D., Singh S., Tuknait A., Chaudhary K., Gautam S. K., Gautam A., Varshney G. C., Raghava G. P. S., ParaPep: a web resource for experimentally validated antiparasitic peptide sequences and their structures. Database, 2014, Article No bau051. Abstract
PEPlifeMathur D., Prakash S., Anand P., Kaur H., Agrawal P., Mehta A., Kumar R., Singh S., Raghava G. P. S., PEPlife: a repository of the halflife of peptides. Scientific Reports, 2016, 6, Article No 36617. Abstract
PepTherDiaD’Aloisio V., Dognini P., Hutcheon G. A., Coxon C. R., PepTherDia: database and structural composition analysis of approved peptide therapeutics and diagnostics. Drug Discovery Today, 2021, 26, 1409-1419. Abstract
QuorumpepsWynendaele E., Bronselaer A., Nielandt J., D’Hondt M., Stalmans S., Bracke N., Verbeke F., Van De Wiele C., De Tré G., De Spiegeleer B., Quorumpeps database: chemical space, microbial origin and functionality of quorum sensing peptides. Nucleic Acids Research, 2013, 41, D655–D659. Abstract
SAPdbMathur D., Kaur H., Dhall A., Sharma N., Raghava G. P. S., SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly. Computers in Biology and Medicine, 2021, 133, Article No 104391. Abstract
SwissSidechainGfeller D., Michielin O., Zoete V., SwissSidechain: a molecular and structural database of non-natural sidechains. Nucleic Acids Research, 2013, 41, D327–D332. Abstract
TopicalPdbMathur D., Mehta A., Firmal P., Bedi G., Sood C., Gautam A., Raghava G. P. S., TopicalPdb: A database of topically delivered peptides. PLoS ONE, 2018, 13, Article No e0190134. Abstract